Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.24□□□□□ -0.13
Bhlhe40O35185 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Gm45453-201ENSMUST00000211758 853 ntBASIC14.24□□□□□ -0.13
Bhlhe40O35185 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.24□□□□□ -0.13
Bhlhe40O35185 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.24□□□□□ -0.13
Bhlhe40O35185 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Bhlhe40O35185 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.23□□□□□ -0.13
Bhlhe40O35185 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.23□□□□□ -0.13
Bhlhe40O35185 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Gm16215-201ENSMUST00000161990 637 ntBASIC14.23□□□□□ -0.13
Bhlhe40O35185 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Gm43703-201ENSMUST00000200523 763 ntBASIC14.23□□□□□ -0.13
Bhlhe40O35185 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Bhlhe40O35185 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Syt7-204ENSMUST00000223586 1344 ntBASIC14.22□□□□□ -0.13
Bhlhe40O35185 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Bhlhe40O35185 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Gm7730-201ENSMUST00000212486 454 ntBASIC14.22□□□□□ -0.13
Bhlhe40O35185 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Bhlhe40O35185 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms