Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm27892-201ENSMUST00000185017 106 ntBASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Gm3222-201ENSMUST00000071282 990 ntBASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Gm11425-201ENSMUST00000119608 498 ntBASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Gm29741-201ENSMUST00000192667 421 ntBASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Gm6983-201ENSMUST00000214912 628 ntBASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Gm9396-201ENSMUST00000076703 567 ntBASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Gm9856-201ENSMUST00000217077 2578 ntBASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 AL645783.1-201ENSMUST00000221416 1832 ntBASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Pcf11G3X9Z4 Gm13859-201ENSMUST00000119936 1423 ntBASIC21.58■■□□□ 1.05
Pcf11G3X9Z4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcf11G3X9Z4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Pcf11G3X9Z4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcf11G3X9Z4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcf11G3X9Z4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Pcf11G3X9Z4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Pcf11G3X9Z4 Gm13226-201ENSMUST00000117838 404 ntBASIC21.58■■□□□ 1.05
Pcf11G3X9Z4 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcf11G3X9Z4 Gm8584-201ENSMUST00000171982 758 ntBASIC21.58■■□□□ 1.05
Pcf11G3X9Z4 Gm27772-201ENSMUST00000184900 187 ntBASIC21.58■■□□□ 1.05
Pcf11G3X9Z4 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC21.58■■□□□ 1.05
Pcf11G3X9Z4 AC166349.1-201ENSMUST00000220866 695 ntBASIC21.58■■□□□ 1.05
Pcf11G3X9Z4 AC125350.2-201ENSMUST00000224737 727 ntBASIC21.58■■□□□ 1.05
Pcf11G3X9Z4 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcf11G3X9Z4 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcf11G3X9Z4 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC21.58■■□□□ 1.05
Pcf11G3X9Z4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcf11G3X9Z4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Pcf11G3X9Z4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcf11G3X9Z4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcf11G3X9Z4 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcf11G3X9Z4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcf11G3X9Z4 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcf11G3X9Z4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcf11G3X9Z4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcf11G3X9Z4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcf11G3X9Z4 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcf11G3X9Z4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Pcf11G3X9Z4 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 Gm43509-201ENSMUST00000196551 2594 ntBASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 Gm9347-201ENSMUST00000211473 1607 ntBASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 Gm14730-201ENSMUST00000122378 1045 ntBASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 Gm7498-201ENSMUST00000203282 1084 ntBASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 AC153962.4-201ENSMUST00000217878 242 ntBASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 Gm44981-201ENSMUST00000205549 1943 ntBASIC21.57■■□□□ 1.04
Pcf11G3X9Z4 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcf11G3X9Z4 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcf11G3X9Z4 AC126549.2-201ENSMUST00000223997 1976 ntBASIC21.56■■□□□ 1.04
Pcf11G3X9Z4 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms