Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc149F6V035 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc149F6V035 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc149F6V035 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc149F6V035 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc149F6V035 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc149F6V035 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc149F6V035 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc149F6V035 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc149F6V035 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc149F6V035 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ccdc149F6V035 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Gm15321-201ENSMUST00000121290 288 ntBASIC14.68□□□□□ -0.06
Ccdc149F6V035 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Ccdc149F6V035 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.68□□□□□ -0.06
Ccdc149F6V035 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc149F6V035 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ccdc149F6V035 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Gm10275-202ENSMUST00000168697 495 ntBASIC14.67□□□□□ -0.06
Ccdc149F6V035 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Gm5745-201ENSMUST00000183748 313 ntBASIC14.67□□□□□ -0.06
Ccdc149F6V035 Gm29667-201ENSMUST00000190817 490 ntBASIC14.67□□□□□ -0.06
Ccdc149F6V035 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Gm20445-201ENSMUST00000061905 565 ntBASIC14.67□□□□□ -0.06
Ccdc149F6V035 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Gm10275-201ENSMUST00000092620 635 ntBASIC14.67□□□□□ -0.06
Ccdc149F6V035 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc149F6V035 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc149F6V035 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc149F6V035 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.66□□□□□ -0.06
Ccdc149F6V035 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.66□□□□□ -0.06
Ccdc149F6V035 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc149F6V035 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc149F6V035 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc149F6V035 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.66□□□□□ -0.06
Ccdc149F6V035 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Ccdc149F6V035 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc149F6V035 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.66□□□□□ -0.06
Ccdc149F6V035 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc149F6V035 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.66□□□□□ -0.06
Ccdc149F6V035 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc149F6V035 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc149F6V035 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc149F6V035 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc149F6V035 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ccdc149F6V035 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc149F6V035 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ccdc149F6V035 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc149F6V035 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc149F6V035 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms