Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Gm8097-201ENSMUST00000117903 829 ntBASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm12887B1AVM1 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm12887B1AVM1 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
Gm12887B1AVM1 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm12887B1AVM1 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm12887B1AVM1 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Gm12887B1AVM1 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm12887B1AVM1 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Gm12887B1AVM1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.71□□□□□ -0.54
Gm12887B1AVM1 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.71□□□□□ -0.54
Gm12887B1AVM1 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm12887B1AVM1 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.71□□□□□ -0.54
Gm12887B1AVM1 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Olfr129-201ENSMUST00000122318 993 ntBASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms