Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Gm9726-201ENSMUST00000180321 678 ntBASIC13.07□□□□□ -0.32
H2afb3S4R1G7 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.07□□□□□ -0.32
H2afb3S4R1G7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb3S4R1G7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Gm13884-201ENSMUST00000118103 829 ntBASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb3S4R1G7 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Gm15590-201ENSMUST00000078419 552 ntBASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Gm10819-201ENSMUST00000099988 561 ntBASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb3S4R1G7 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms