Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Gm24659-201ENSMUST00000180212 110 ntBASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Gm24169-201ENSMUST00000180244 110 ntBASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Gm23689-201ENSMUST00000180354 110 ntBASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Gm27359-201ENSMUST00000184153 110 ntBASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Gm27785-201ENSMUST00000184268 110 ntBASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Gm27466-201ENSMUST00000184396 110 ntBASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Gm27703-201ENSMUST00000184836 110 ntBASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Gm20949-201ENSMUST00000206478 952 ntBASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.38□□□□□ -0.27
Phf1Q9Z1B8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Gm25948-201ENSMUST00000175334 112 ntBASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Gm27321-201ENSMUST00000185021 205 ntBASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Phf1Q9Z1B8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Phf1Q9Z1B8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms