Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 CT010486.3-201ENSMUST00000224555 811 ntBASIC13.62□□□□□ -0.23
SrfQ9JM73 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SrfQ9JM73 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SrfQ9JM73 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SrfQ9JM73 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SrfQ9JM73 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SrfQ9JM73 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.62□□□□□ -0.23
SrfQ9JM73 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SrfQ9JM73 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SrfQ9JM73 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SrfQ9JM73 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SrfQ9JM73 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SrfQ9JM73 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SrfQ9JM73 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SrfQ9JM73 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SrfQ9JM73 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SrfQ9JM73 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SrfQ9JM73 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SrfQ9JM73 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.62□□□□□ -0.23
SrfQ9JM73 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SrfQ9JM73 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SrfQ9JM73 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SrfQ9JM73 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SrfQ9JM73 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.61□□□□□ -0.23
SrfQ9JM73 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SrfQ9JM73 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SrfQ9JM73 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
SrfQ9JM73 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SrfQ9JM73 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SrfQ9JM73 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SrfQ9JM73 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SrfQ9JM73 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SrfQ9JM73 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SrfQ9JM73 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SrfQ9JM73 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SrfQ9JM73 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SrfQ9JM73 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SrfQ9JM73 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SrfQ9JM73 Gm15678-201ENSMUST00000117573 960 ntBASIC13.61□□□□□ -0.23
SrfQ9JM73 Mir1894-201ENSMUST00000122802 81 ntBASIC13.61□□□□□ -0.23
SrfQ9JM73 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SrfQ9JM73 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SrfQ9JM73 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.61□□□□□ -0.23
SrfQ9JM73 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SrfQ9JM73 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC13.61□□□□□ -0.23
SrfQ9JM73 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SrfQ9JM73 Gm28745-201ENSMUST00000190069 305 ntBASIC13.61□□□□□ -0.23
SrfQ9JM73 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.61□□□□□ -0.23
SrfQ9JM73 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.61□□□□□ -0.23
SrfQ9JM73 AC124408.1-201ENSMUST00000228938 707 ntBASIC13.61□□□□□ -0.23
SrfQ9JM73 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SrfQ9JM73 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SrfQ9JM73 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SrfQ9JM73 Prob1-201ENSMUST00000097619 3021 ntBASIC13.61□□□□□ -0.23
SrfQ9JM73 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SrfQ9JM73 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.61□□□□□ -0.23
SrfQ9JM73 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SrfQ9JM73 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SrfQ9JM73 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.61□□□□□ -0.23
SrfQ9JM73 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SrfQ9JM73 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SrfQ9JM73 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
SrfQ9JM73 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SrfQ9JM73 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SrfQ9JM73 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SrfQ9JM73 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SrfQ9JM73 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
SrfQ9JM73 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SrfQ9JM73 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
SrfQ9JM73 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.6□□□□□ -0.23
SrfQ9JM73 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SrfQ9JM73 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SrfQ9JM73 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SrfQ9JM73 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SrfQ9JM73 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.6□□□□□ -0.23
SrfQ9JM73 Gm11425-201ENSMUST00000119608 498 ntBASIC13.6□□□□□ -0.23
SrfQ9JM73 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.6□□□□□ -0.23
SrfQ9JM73 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SrfQ9JM73 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.6□□□□□ -0.23
SrfQ9JM73 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SrfQ9JM73 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SrfQ9JM73 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SrfQ9JM73 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.6□□□□□ -0.23
SrfQ9JM73 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SrfQ9JM73 Gm44608-201ENSMUST00000206827 855 ntBASIC13.6□□□□□ -0.23
SrfQ9JM73 Gm45841-201ENSMUST00000207700 164 ntBASIC13.6□□□□□ -0.23
SrfQ9JM73 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SrfQ9JM73 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SrfQ9JM73 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SrfQ9JM73 Gm9396-201ENSMUST00000076703 567 ntBASIC13.6□□□□□ -0.23
SrfQ9JM73 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SrfQ9JM73 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SrfQ9JM73 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SrfQ9JM73 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.6□□□□□ -0.23
SrfQ9JM73 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SrfQ9JM73 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.6□□□□□ -0.23
SrfQ9JM73 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
SrfQ9JM73 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SrfQ9JM73 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SrfQ9JM73 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms