Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tubb3Q9ERD7 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Gm15427-201ENSMUST00000117288 531 ntBASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tubb3Q9ERD7 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Tubb3Q9ERD7 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Mir1895-201ENSMUST00000122615 79 ntBASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Gm27494-201ENSMUST00000184735 189 ntBASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.41□□□□□ -0.1
Tubb3Q9ERD7 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms