Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm7774-201ENSMUST00000200064 533 ntBASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Efs-202ENSMUST00000227037 2540 ntBASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cdc40Q9DC48 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Gm24158-201ENSMUST00000175263 71 ntBASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Gm18057-201ENSMUST00000208220 503 ntBASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdc40Q9DC48 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdc40Q9DC48 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdc40Q9DC48 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cdc40Q9DC48 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdc40Q9DC48 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.46□□□□□ -0.25
Cdc40Q9DC48 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdc40Q9DC48 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdc40Q9DC48 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdc40Q9DC48 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdc40Q9DC48 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cdc40Q9DC48 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdc40Q9DC48 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Cdc40Q9DC48 Mir449b-201ENSMUST00000104833 80 ntBASIC13.46□□□□□ -0.25
Cdc40Q9DC48 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cdc40Q9DC48 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.46□□□□□ -0.25
Cdc40Q9DC48 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.46□□□□□ -0.25
Cdc40Q9DC48 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms