Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Chmp5Q9D7S9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp5Q9D7S9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp5Q9D7S9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.17■□□□□ 0.5
Chmp5Q9D7S9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.17■□□□□ 0.5
Chmp5Q9D7S9 Gm28033-201ENSMUST00000184224 96 ntBASIC18.17■□□□□ 0.5
Chmp5Q9D7S9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.17■□□□□ 0.5
Chmp5Q9D7S9 Gm43347-201ENSMUST00000200226 580 ntBASIC18.17■□□□□ 0.5
Chmp5Q9D7S9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp5Q9D7S9 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp5Q9D7S9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Chmp5Q9D7S9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp5Q9D7S9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp5Q9D7S9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp5Q9D7S9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp5Q9D7S9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Chmp5Q9D7S9 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Gm7230-201ENSMUST00000173026 815 ntBASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Gm34391-201ENSMUST00000203706 907 ntBASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Birc2-201ENSMUST00000054878 378 ntBASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Chmp5Q9D7S9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Gm37691-201ENSMUST00000192147 2573 ntBASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Gm15173-201ENSMUST00000122049 433 ntBASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Gm6550-201ENSMUST00000187574 993 ntBASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Acot6-202ENSMUST00000222921 3622 ntBASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Gm30238-201ENSMUST00000195528 2603 ntBASIC18.15■□□□□ 0.5
Chmp5Q9D7S9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Chmp5Q9D7S9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
Chmp5Q9D7S9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
Chmp5Q9D7S9 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC18.14■□□□□ 0.5
Chmp5Q9D7S9 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Chmp5Q9D7S9 Gm26513-201ENSMUST00000181802 2489 ntBASIC18.14■□□□□ 0.5
Chmp5Q9D7S9 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Chmp5Q9D7S9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp5Q9D7S9 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp5Q9D7S9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp5Q9D7S9 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp5Q9D7S9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp5Q9D7S9 Gm45630-201ENSMUST00000210243 1911 ntBASIC18.14■□□□□ 0.49
Chmp5Q9D7S9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp5Q9D7S9 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC18.14■□□□□ 0.49
Chmp5Q9D7S9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp5Q9D7S9 Gm6376-201ENSMUST00000209407 580 ntBASIC18.14■□□□□ 0.49
Chmp5Q9D7S9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp5Q9D7S9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp5Q9D7S9 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp5Q9D7S9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Chmp5Q9D7S9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC18.14■□□□□ 0.49
Chmp5Q9D7S9 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp5Q9D7S9 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms