Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otud1Q9CUB6 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otud1Q9CUB6 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otud1Q9CUB6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Otud1Q9CUB6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otud1Q9CUB6 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otud1Q9CUB6 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otud1Q9CUB6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otud1Q9CUB6 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otud1Q9CUB6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.73□□□□□ -0.21
Otud1Q9CUB6 Gm17837-201ENSMUST00000186435 985 ntBASIC13.73□□□□□ -0.21
Otud1Q9CUB6 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otud1Q9CUB6 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otud1Q9CUB6 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Otud1Q9CUB6 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Otud1Q9CUB6 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otud1Q9CUB6 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otud1Q9CUB6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otud1Q9CUB6 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otud1Q9CUB6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.73□□□□□ -0.21
Otud1Q9CUB6 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otud1Q9CUB6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Otud1Q9CUB6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.73□□□□□ -0.21
Otud1Q9CUB6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Gm6888-201ENSMUST00000221983 706 ntBASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Otud1Q9CUB6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Gm29310-201ENSMUST00000185468 696 ntBASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Gm21825-201ENSMUST00000185728 696 ntBASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Gm29109-201ENSMUST00000185895 696 ntBASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Gm21896-201ENSMUST00000186520 696 ntBASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Gm21873-201ENSMUST00000186728 696 ntBASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Gm21794-201ENSMUST00000187056 696 ntBASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Gm21880-201ENSMUST00000187275 696 ntBASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Gm21826-201ENSMUST00000187451 696 ntBASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Gm21198-201ENSMUST00000188393 696 ntBASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Gm21749-201ENSMUST00000189343 696 ntBASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Gm21901-201ENSMUST00000189568 696 ntBASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Gm29424-201ENSMUST00000189716 696 ntBASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Gm28599-201ENSMUST00000189838 694 ntBASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Gm21867-201ENSMUST00000189917 696 ntBASIC13.71□□□□□ -0.21
Otud1Q9CUB6 Gm29269-201ENSMUST00000190087 696 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms