Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nipsnap3bQ9CQE1 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Gm13464-201ENSMUST00000119418 935 ntBASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Gm27300-201ENSMUST00000184085 97 ntBASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Gm27335-201ENSMUST00000184758 97 ntBASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nipsnap3bQ9CQE1 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Mir5131-201ENSMUST00000175426 93 ntBASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nipsnap3bQ9CQE1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms