Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cstf1Q99LC2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cstf1Q99LC2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cstf1Q99LC2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cstf1Q99LC2 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.5□□□□□ -0.09
Cstf1Q99LC2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cstf1Q99LC2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cstf1Q99LC2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cstf1Q99LC2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cstf1Q99LC2 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.5□□□□□ -0.09
Cstf1Q99LC2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cstf1Q99LC2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cstf1Q99LC2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cstf1Q99LC2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm29310-201ENSMUST00000185468 696 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm21825-201ENSMUST00000185728 696 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm29109-201ENSMUST00000185895 696 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm21896-201ENSMUST00000186520 696 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm21873-201ENSMUST00000186728 696 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm21794-201ENSMUST00000187056 696 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm21880-201ENSMUST00000187275 696 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm21826-201ENSMUST00000187451 696 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm21198-201ENSMUST00000188393 696 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm21749-201ENSMUST00000189343 696 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm21901-201ENSMUST00000189568 696 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm29424-201ENSMUST00000189716 696 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm28599-201ENSMUST00000189838 694 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm21867-201ENSMUST00000189917 696 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm29269-201ENSMUST00000190087 696 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm21722-201ENSMUST00000190153 696 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm28423-201ENSMUST00000190701 696 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm21899-201ENSMUST00000190745 696 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm21910-201ENSMUST00000191163 696 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm21849-201ENSMUST00000191571 696 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm28678-201ENSMUST00000191593 696 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm20910-201ENSMUST00000193268 696 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm21871-201ENSMUST00000194621 696 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gm9229-201ENSMUST00000222777 126 ntBASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cstf1Q99LC2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cstf1Q99LC2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms