Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 Gm15460-201ENSMUST00000118147 391 ntBASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 Gm15823-201ENSMUST00000064305 670 ntBASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhb5Q91XZ5 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb5Q91XZ5 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb5Q91XZ5 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb5Q91XZ5 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb5Q91XZ5 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhb5Q91XZ5 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb5Q91XZ5 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhb5Q91XZ5 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb5Q91XZ5 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.05■□□□□ 0.32
Pcdhb5Q91XZ5 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC17.05■□□□□ 0.32
Pcdhb5Q91XZ5 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC17.05■□□□□ 0.32
Pcdhb5Q91XZ5 Gm12091-201ENSMUST00000146791 830 ntBASIC17.05■□□□□ 0.32
Pcdhb5Q91XZ5 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb5Q91XZ5 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.05■□□□□ 0.32
Pcdhb5Q91XZ5 Gm45668-201ENSMUST00000211271 493 ntBASIC17.05■□□□□ 0.32
Pcdhb5Q91XZ5 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb5Q91XZ5 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb5Q91XZ5 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb5Q91XZ5 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb5Q91XZ5 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb5Q91XZ5 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb5Q91XZ5 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhb5Q91XZ5 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Ighv5-13-201ENSMUST00000193550 290 ntBASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Gm37917-201ENSMUST00000194711 392 ntBASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb5Q91XZ5 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Gm9115-201ENSMUST00000120192 1348 ntBASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Gm14127-201ENSMUST00000117906 678 ntBASIC17.03■□□□□ 0.32
Pcdhb5Q91XZ5 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms