Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhga11Q91XY8 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.06□□□□□ -0.16
Pcdhga11Q91XY8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga11Q91XY8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga11Q91XY8 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga11Q91XY8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga11Q91XY8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhga11Q91XY8 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Gm8749-201ENSMUST00000117737 331 ntBASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Gm11594-201ENSMUST00000122313 162 ntBASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga11Q91XY8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga11Q91XY8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Gm9727-201ENSMUST00000161387 555 ntBASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga11Q91XY8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms