Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx1Q91V10 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx1Q91V10 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx1Q91V10 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx1Q91V10 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx1Q91V10 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Vsx1Q91V10 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.34□□□□□ -0.11
Vsx1Q91V10 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx1Q91V10 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Vsx1Q91V10 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
Vsx1Q91V10 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vsx1Q91V10 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Vsx1Q91V10 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Vsx1Q91V10 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx1Q91V10 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx1Q91V10 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx1Q91V10 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx1Q91V10 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx1Q91V10 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx1Q91V10 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Vsx1Q91V10 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx1Q91V10 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.33□□□□□ -0.12
Vsx1Q91V10 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.33□□□□□ -0.12
Vsx1Q91V10 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx1Q91V10 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx1Q91V10 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vsx1Q91V10 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx1Q91V10 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vsx1Q91V10 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx1Q91V10 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx1Q91V10 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vsx1Q91V10 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Vsx1Q91V10 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.33□□□□□ -0.12
Vsx1Q91V10 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx1Q91V10 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx1Q91V10 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx1Q91V10 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx1Q91V10 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx1Q91V10 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.33□□□□□ -0.12
Vsx1Q91V10 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx1Q91V10 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.32□□□□□ -0.12
Vsx1Q91V10 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vsx1Q91V10 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx1Q91V10 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx1Q91V10 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.32□□□□□ -0.12
Vsx1Q91V10 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx1Q91V10 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.32□□□□□ -0.12
Vsx1Q91V10 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx1Q91V10 Gm21854-201ENSMUST00000179901 471 ntBASIC14.32□□□□□ -0.12
Vsx1Q91V10 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.32□□□□□ -0.12
Vsx1Q91V10 Gm28760-201ENSMUST00000185995 736 ntBASIC14.32□□□□□ -0.12
Vsx1Q91V10 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.32□□□□□ -0.12
Vsx1Q91V10 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.32□□□□□ -0.12
Vsx1Q91V10 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx1Q91V10 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vsx1Q91V10 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vsx1Q91V10 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.32□□□□□ -0.12
Vsx1Q91V10 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.32□□□□□ -0.12
Vsx1Q91V10 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx1Q91V10 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx1Q91V10 Gm9797-201ENSMUST00000052902 613 ntBASIC14.32□□□□□ -0.12
Vsx1Q91V10 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Vsx1Q91V10 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx1Q91V10 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx1Q91V10 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx1Q91V10 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Vsx1Q91V10 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Vsx1Q91V10 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx1Q91V10 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx1Q91V10 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx1Q91V10 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx1Q91V10 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.32□□□□□ -0.12
Vsx1Q91V10 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.31□□□□□ -0.12
Vsx1Q91V10 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.31□□□□□ -0.12
Vsx1Q91V10 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Mir6392-201ENSMUST00000184924 108 ntBASIC14.31□□□□□ -0.12
Vsx1Q91V10 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.31□□□□□ -0.12
Vsx1Q91V10 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.31□□□□□ -0.12
Vsx1Q91V10 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms