Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
StrcQ8VIM6 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
StrcQ8VIM6 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
StrcQ8VIM6 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
StrcQ8VIM6 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.92■□□□□ 0.3
StrcQ8VIM6 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
StrcQ8VIM6 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
StrcQ8VIM6 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
StrcQ8VIM6 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
StrcQ8VIM6 Gm38158-201ENSMUST00000194617 339 ntBASIC16.92■□□□□ 0.3
StrcQ8VIM6 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
StrcQ8VIM6 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
StrcQ8VIM6 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
StrcQ8VIM6 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
StrcQ8VIM6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
StrcQ8VIM6 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
StrcQ8VIM6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
StrcQ8VIM6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
StrcQ8VIM6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
StrcQ8VIM6 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC16.92■□□□□ 0.3
StrcQ8VIM6 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
StrcQ8VIM6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Gm5687-201ENSMUST00000118252 640 ntBASIC16.91■□□□□ 0.3
StrcQ8VIM6 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Gm2991-201ENSMUST00000173338 480 ntBASIC16.91■□□□□ 0.3
StrcQ8VIM6 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC16.91■□□□□ 0.3
StrcQ8VIM6 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Tyms-ps-201ENSMUST00000219550 915 ntBASIC16.91■□□□□ 0.3
StrcQ8VIM6 AC154462.2-201ENSMUST00000227519 370 ntBASIC16.91■□□□□ 0.3
StrcQ8VIM6 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Gm6023-201ENSMUST00000118217 606 ntBASIC16.91■□□□□ 0.3
StrcQ8VIM6 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC16.91■□□□□ 0.3
StrcQ8VIM6 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
StrcQ8VIM6 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Gm44364-201ENSMUST00000198368 141 ntBASIC16.91■□□□□ 0.3
StrcQ8VIM6 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Gm18935-201ENSMUST00000212692 664 ntBASIC16.91■□□□□ 0.3
StrcQ8VIM6 Gm4935-201ENSMUST00000221316 1198 ntBASIC16.91■□□□□ 0.3
StrcQ8VIM6 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
StrcQ8VIM6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
StrcQ8VIM6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
StrcQ8VIM6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
StrcQ8VIM6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.9■□□□□ 0.3
StrcQ8VIM6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
StrcQ8VIM6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
StrcQ8VIM6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
StrcQ8VIM6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
StrcQ8VIM6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
StrcQ8VIM6 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
StrcQ8VIM6 Gm10040-201ENSMUST00000080726 1662 ntBASIC16.9■□□□□ 0.3
StrcQ8VIM6 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
StrcQ8VIM6 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
StrcQ8VIM6 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC16.9■□□□□ 0.3
StrcQ8VIM6 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
StrcQ8VIM6 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC16.9■□□□□ 0.3
StrcQ8VIM6 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
StrcQ8VIM6 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
StrcQ8VIM6 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
StrcQ8VIM6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
StrcQ8VIM6 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
StrcQ8VIM6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
StrcQ8VIM6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
StrcQ8VIM6 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
StrcQ8VIM6 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
StrcQ8VIM6 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
StrcQ8VIM6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
StrcQ8VIM6 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
StrcQ8VIM6 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
StrcQ8VIM6 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC16.89■□□□□ 0.29
StrcQ8VIM6 Gm13123-201ENSMUST00000122173 492 ntBASIC16.89■□□□□ 0.29
StrcQ8VIM6 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
StrcQ8VIM6 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC16.89■□□□□ 0.29
StrcQ8VIM6 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
StrcQ8VIM6 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
StrcQ8VIM6 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms