Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Gm4535-201ENSMUST00000182274 558 ntBASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nup35Q8R4R6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Gm10355-201ENSMUST00000097146 517 ntBASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nup35Q8R4R6 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.84□□□□□ -0.51
Nup35Q8R4R6 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.84□□□□□ -0.51
Nup35Q8R4R6 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nup35Q8R4R6 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nup35Q8R4R6 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Nup35Q8R4R6 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nup35Q8R4R6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Gm13464-201ENSMUST00000119418 935 ntBASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nup35Q8R4R6 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms