Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm45059-201ENSMUST00000205558 1077 ntBASIC18.51■□□□□ 0.55
Chmp7Q8R1T1 Gm18624-201ENSMUST00000220966 658 ntBASIC18.51■□□□□ 0.55
Chmp7Q8R1T1 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp7Q8R1T1 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp7Q8R1T1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp7Q8R1T1 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp7Q8R1T1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp7Q8R1T1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC18.51■□□□□ 0.55
Chmp7Q8R1T1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Chmp7Q8R1T1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp7Q8R1T1 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp7Q8R1T1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp7Q8R1T1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp7Q8R1T1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Gm43433-201ENSMUST00000196573 481 ntBASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Chmp7Q8R1T1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 AC154687.2-201ENSMUST00000223853 640 ntBASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp7Q8R1T1 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Gm19220-201ENSMUST00000222682 803 ntBASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms