Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Gm5312-201ENSMUST00000203728 547 ntBASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm22065-201ENSMUST00000103753 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm22066-201ENSMUST00000103761 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm24932-201ENSMUST00000103763 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm24115-201ENSMUST00000103799 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm22190-201ENSMUST00000103827 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm22191-201ENSMUST00000103831 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm24721-201ENSMUST00000103849 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm28018-201ENSMUST00000103869 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm26399-201ENSMUST00000103937 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm25349-201ENSMUST00000177728 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm23616-201ENSMUST00000177797 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm25871-201ENSMUST00000177816 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm24752-201ENSMUST00000178240 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm24496-201ENSMUST00000178287 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm25649-201ENSMUST00000178476 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm25548-201ENSMUST00000178681 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm23147-201ENSMUST00000178841 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm26095-201ENSMUST00000179270 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm22171-201ENSMUST00000179283 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm23936-201ENSMUST00000179354 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm22619-201ENSMUST00000179516 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm25255-201ENSMUST00000179579 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm24755-201ENSMUST00000179691 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm26506-201ENSMUST00000179692 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm25086-201ENSMUST00000179931 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm23243-201ENSMUST00000180047 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm24659-201ENSMUST00000180212 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm24169-201ENSMUST00000180244 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm23689-201ENSMUST00000180354 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm27359-201ENSMUST00000184153 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm27785-201ENSMUST00000184268 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm27466-201ENSMUST00000184396 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm27703-201ENSMUST00000184836 110 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sf3a1Q8K4Z5 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3a1Q8K4Z5 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3a1Q8K4Z5 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.74■□□□□ 0.43
Sf3a1Q8K4Z5 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3a1Q8K4Z5 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3a1Q8K4Z5 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3a1Q8K4Z5 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3a1Q8K4Z5 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3a1Q8K4Z5 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Sf3a1Q8K4Z5 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3a1Q8K4Z5 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3a1Q8K4Z5 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3a1Q8K4Z5 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Sf3a1Q8K4Z5 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Sf3a1Q8K4Z5 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms