Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab43Q8CG50 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab43Q8CG50 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab43Q8CG50 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rab43Q8CG50 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab43Q8CG50 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab43Q8CG50 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab43Q8CG50 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rab43Q8CG50 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab43Q8CG50 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab43Q8CG50 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.15□□□□□ -0.14
Rab43Q8CG50 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Rab43Q8CG50 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Gm12490-201ENSMUST00000120255 560 ntBASIC14.14□□□□□ -0.15
Rab43Q8CG50 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.14□□□□□ -0.15
Rab43Q8CG50 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.14□□□□□ -0.15
Rab43Q8CG50 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.14□□□□□ -0.15
Rab43Q8CG50 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.14□□□□□ -0.15
Rab43Q8CG50 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.14□□□□□ -0.15
Rab43Q8CG50 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.14□□□□□ -0.15
Rab43Q8CG50 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab43Q8CG50 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.14□□□□□ -0.15
Rab43Q8CG50 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab43Q8CG50 Sybu-209ENSMUST00000228639 4113 ntBASIC14.13□□□□□ -0.15
Rab43Q8CG50 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rab43Q8CG50 AA619741-201ENSMUST00000195095 646 ntBASIC14.13□□□□□ -0.15
Rab43Q8CG50 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab43Q8CG50 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.13□□□□□ -0.15
Rab43Q8CG50 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Mir125a-201ENSMUST00000083545 68 ntBASIC14.13□□□□□ -0.15
Rab43Q8CG50 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rab43Q8CG50 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rab43Q8CG50 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab43Q8CG50 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.12□□□□□ -0.15
Rab43Q8CG50 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.12□□□□□ -0.15
Rab43Q8CG50 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rab43Q8CG50 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab43Q8CG50 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab43Q8CG50 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rab43Q8CG50 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab43Q8CG50 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab43Q8CG50 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab43Q8CG50 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rab43Q8CG50 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rab43Q8CG50 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab43Q8CG50 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab43Q8CG50 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab43Q8CG50 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rab43Q8CG50 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rab43Q8CG50 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rab43Q8CG50 Gm14928-201ENSMUST00000120198 477 ntBASIC14.12□□□□□ -0.15
Rab43Q8CG50 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.12□□□□□ -0.15
Rab43Q8CG50 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.12□□□□□ -0.15
Rab43Q8CG50 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms