Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph6aQ8CDR2 Gm21854-201ENSMUST00000179901 471 ntBASIC18.87■□□□□ 0.61
Rsph6aQ8CDR2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph6aQ8CDR2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph6aQ8CDR2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph6aQ8CDR2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.87■□□□□ 0.61
Rsph6aQ8CDR2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph6aQ8CDR2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph6aQ8CDR2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph6aQ8CDR2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 Gm36991-201ENSMUST00000191800 648 ntBASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 Gm42612-201ENSMUST00000197986 623 ntBASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 Gm43170-201ENSMUST00000199827 612 ntBASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rsph6aQ8CDR2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Gm12859-201ENSMUST00000117834 427 ntBASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Gm33320-201ENSMUST00000192232 530 ntBASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 AL593843.1-201ENSMUST00000195891 145 ntBASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Gm19324-201ENSMUST00000213229 1169 ntBASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.85■□□□□ 0.61
Rsph6aQ8CDR2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Gm15957-201ENSMUST00000118893 974 ntBASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 AC140375.2-201ENSMUST00000225283 584 ntBASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Gm14451-201ENSMUST00000121581 1542 ntBASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rsph6aQ8CDR2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rsph6aQ8CDR2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rsph6aQ8CDR2 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rsph6aQ8CDR2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rsph6aQ8CDR2 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rsph6aQ8CDR2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rsph6aQ8CDR2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rsph6aQ8CDR2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Rsph6aQ8CDR2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rsph6aQ8CDR2 Gm15460-201ENSMUST00000118147 391 ntBASIC18.83■□□□□ 0.6
Rsph6aQ8CDR2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Rsph6aQ8CDR2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC18.83■□□□□ 0.6
Rsph6aQ8CDR2 Gm5745-201ENSMUST00000183748 313 ntBASIC18.83■□□□□ 0.6
Rsph6aQ8CDR2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rsph6aQ8CDR2 Gm18515-201ENSMUST00000219755 797 ntBASIC18.83■□□□□ 0.6
Rsph6aQ8CDR2 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rsph6aQ8CDR2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms