Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Alx1Q8C8B0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Alx1Q8C8B0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.89■□□□□ 0.29
Alx1Q8C8B0 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Alx1Q8C8B0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Alx1Q8C8B0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Alx1Q8C8B0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Alx1Q8C8B0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Alx1Q8C8B0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Alx1Q8C8B0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Alx1Q8C8B0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.89■□□□□ 0.29
Alx1Q8C8B0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Alx1Q8C8B0 Gm17837-201ENSMUST00000186435 985 ntBASIC16.89■□□□□ 0.29
Alx1Q8C8B0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.89■□□□□ 0.29
Alx1Q8C8B0 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.89■□□□□ 0.29
Alx1Q8C8B0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Alx1Q8C8B0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Alx1Q8C8B0 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Alx1Q8C8B0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.89■□□□□ 0.29
Alx1Q8C8B0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Alx1Q8C8B0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Alx1Q8C8B0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Alx1Q8C8B0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Gm44608-201ENSMUST00000206827 855 ntBASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Gm9063-201ENSMUST00000223299 582 ntBASIC16.88■□□□□ 0.29
Alx1Q8C8B0 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Alx1Q8C8B0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Auts2-212ENSMUST00000178555 309 ntBASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Gm44344-201ENSMUST00000200287 129 ntBASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Gm7775-201ENSMUST00000218871 853 ntBASIC16.87■□□□□ 0.29
Alx1Q8C8B0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Alx1Q8C8B0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms