Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Ccdc60Q8C4J0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc60Q8C4J0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc60Q8C4J0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc60Q8C4J0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Ccdc60Q8C4J0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc60Q8C4J0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.52■□□□□ 0.56
Ccdc60Q8C4J0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc60Q8C4J0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc60Q8C4J0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc60Q8C4J0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC18.52■□□□□ 0.56
Ccdc60Q8C4J0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccdc60Q8C4J0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccdc60Q8C4J0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Ccdc60Q8C4J0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccdc60Q8C4J0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc60Q8C4J0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc60Q8C4J0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC18.51■□□□□ 0.55
Ccdc60Q8C4J0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc60Q8C4J0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc60Q8C4J0 Gm14451-201ENSMUST00000121581 1542 ntBASIC18.51■□□□□ 0.55
Ccdc60Q8C4J0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc60Q8C4J0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc60Q8C4J0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC18.51■□□□□ 0.55
Ccdc60Q8C4J0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC18.51■□□□□ 0.55
Ccdc60Q8C4J0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ccdc60Q8C4J0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc60Q8C4J0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc60Q8C4J0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Ccdc60Q8C4J0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc60Q8C4J0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc60Q8C4J0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc60Q8C4J0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.51■□□□□ 0.55
Ccdc60Q8C4J0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc60Q8C4J0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Gm12134-201ENSMUST00000122109 520 ntBASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Gm12620-201ENSMUST00000119791 1986 ntBASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Gm12612-201ENSMUST00000140182 1986 ntBASIC18.5■□□□□ 0.55
Ccdc60Q8C4J0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Ccdc60Q8C4J0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc60Q8C4J0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ccdc60Q8C4J0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ccdc60Q8C4J0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc60Q8C4J0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ccdc60Q8C4J0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ccdc60Q8C4J0 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc60Q8C4J0 Gm44645-201ENSMUST00000205492 1653 ntBASIC18.49■□□□□ 0.55
Ccdc60Q8C4J0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc60Q8C4J0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc60Q8C4J0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc60Q8C4J0 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc60Q8C4J0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Ccdc60Q8C4J0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc60Q8C4J0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc60Q8C4J0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc60Q8C4J0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Gm24158-201ENSMUST00000175263 71 ntBASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Gm9824-201ENSMUST00000178707 561 ntBASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Gm29541-201ENSMUST00000191351 678 ntBASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Gm18049-201ENSMUST00000208909 581 ntBASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms