Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Usp44Q8C2S0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp44Q8C2S0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp44Q8C2S0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp44Q8C2S0 Gm15693-201ENSMUST00000120470 637 ntBASIC16.98■□□□□ 0.31
Usp44Q8C2S0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp44Q8C2S0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.98■□□□□ 0.31
Usp44Q8C2S0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp44Q8C2S0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Usp44Q8C2S0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp44Q8C2S0 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.98■□□□□ 0.31
Usp44Q8C2S0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp44Q8C2S0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Usp44Q8C2S0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp44Q8C2S0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.98■□□□□ 0.31
Usp44Q8C2S0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp44Q8C2S0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Mir449b-201ENSMUST00000104833 80 ntBASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Gm12882-201ENSMUST00000121696 517 ntBASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Usp44Q8C2S0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Gm24158-201ENSMUST00000175263 71 ntBASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Gm5779-201ENSMUST00000218467 910 ntBASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp44Q8C2S0 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Usp44Q8C2S0 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.96■□□□□ 0.3
Usp44Q8C2S0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Usp44Q8C2S0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Usp44Q8C2S0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Usp44Q8C2S0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp44Q8C2S0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Gm5566-201ENSMUST00000116118 459 ntBASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Gm10253-201ENSMUST00000194270 940 ntBASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp44Q8C2S0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms