Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Mir8102-201ENSMUST00000184148 139 ntBASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdk5rap1Q8BTW8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm12151-201ENSMUST00000121374 290 ntBASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Mir7684-201ENSMUST00000183858 60 ntBASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm44344-201ENSMUST00000200287 129 ntBASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.78□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.77□□□□□ -0.2
Cdk5rap1Q8BTW8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Cdk5rap1Q8BTW8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdk5rap1Q8BTW8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdk5rap1Q8BTW8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Gm27989-201ENSMUST00000184721 107 ntBASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdk5rap1Q8BTW8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdk5rap1Q8BTW8 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms