Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Usp54Q8BL06 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp54Q8BL06 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC20.29■□□□□ 0.84
Usp54Q8BL06 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Usp54Q8BL06 Proscos-202ENSMUST00000178990 666 ntBASIC20.29■□□□□ 0.84
Usp54Q8BL06 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC20.29■□□□□ 0.84
Usp54Q8BL06 AC166997.1-201ENSMUST00000225122 572 ntBASIC20.29■□□□□ 0.84
Usp54Q8BL06 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp54Q8BL06 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp54Q8BL06 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp54Q8BL06 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Usp54Q8BL06 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp54Q8BL06 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp54Q8BL06 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp54Q8BL06 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp54Q8BL06 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp54Q8BL06 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Usp54Q8BL06 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp54Q8BL06 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Usp54Q8BL06 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Usp54Q8BL06 Gm9299-201ENSMUST00000206392 1140 ntBASIC20.29■□□□□ 0.84
Usp54Q8BL06 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp54Q8BL06 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC20.28■□□□□ 0.84
Usp54Q8BL06 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp54Q8BL06 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Usp54Q8BL06 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Usp54Q8BL06 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp54Q8BL06 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Usp54Q8BL06 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Usp54Q8BL06 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC20.28■□□□□ 0.84
Usp54Q8BL06 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC20.28■□□□□ 0.84
Usp54Q8BL06 Gm45841-201ENSMUST00000207700 164 ntBASIC20.28■□□□□ 0.84
Usp54Q8BL06 CT030704.2-201ENSMUST00000228887 494 ntBASIC20.28■□□□□ 0.84
Usp54Q8BL06 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp54Q8BL06 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp54Q8BL06 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Usp54Q8BL06 Gm11661-201ENSMUST00000121761 1327 ntBASIC20.28■□□□□ 0.84
Usp54Q8BL06 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC20.28■□□□□ 0.84
Usp54Q8BL06 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Usp54Q8BL06 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp54Q8BL06 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Usp54Q8BL06 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Usp54Q8BL06 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC20.27■□□□□ 0.84
Usp54Q8BL06 Gm45630-201ENSMUST00000210243 1911 ntBASIC20.27■□□□□ 0.84
Usp54Q8BL06 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp54Q8BL06 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp54Q8BL06 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp54Q8BL06 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Usp54Q8BL06 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Usp54Q8BL06 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Usp54Q8BL06 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp54Q8BL06 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp54Q8BL06 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
Usp54Q8BL06 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Usp54Q8BL06 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Usp54Q8BL06 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC20.27■□□□□ 0.83
Usp54Q8BL06 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC20.26■□□□□ 0.83
Usp54Q8BL06 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp54Q8BL06 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp54Q8BL06 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Usp54Q8BL06 Gm6152-201ENSMUST00000151704 340 ntBASIC20.26■□□□□ 0.83
Usp54Q8BL06 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp54Q8BL06 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
Usp54Q8BL06 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Usp54Q8BL06 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp54Q8BL06 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp54Q8BL06 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp54Q8BL06 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp54Q8BL06 Ankra2-208ENSMUST00000226100 1476 ntBASIC20.26■□□□□ 0.83
Usp54Q8BL06 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp54Q8BL06 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp54Q8BL06 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp54Q8BL06 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp54Q8BL06 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp54Q8BL06 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC20.25■□□□□ 0.83
Usp54Q8BL06 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC20.25■□□□□ 0.83
Usp54Q8BL06 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC20.25■□□□□ 0.83
Usp54Q8BL06 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC20.25■□□□□ 0.83
Usp54Q8BL06 Gm18054-201ENSMUST00000207539 555 ntBASIC20.25■□□□□ 0.83
Usp54Q8BL06 AC126253.1-201ENSMUST00000227974 824 ntBASIC20.25■□□□□ 0.83
Usp54Q8BL06 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp54Q8BL06 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Usp54Q8BL06 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Usp54Q8BL06 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp54Q8BL06 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp54Q8BL06 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp54Q8BL06 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp54Q8BL06 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp54Q8BL06 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp54Q8BL06 Gm27847-201ENSMUST00000183711 107 ntBASIC20.25■□□□□ 0.83
Usp54Q8BL06 Gm27375-201ENSMUST00000183799 107 ntBASIC20.25■□□□□ 0.83
Usp54Q8BL06 Gm44397-201ENSMUST00000195950 113 ntBASIC20.25■□□□□ 0.83
Usp54Q8BL06 Gm9257-201ENSMUST00000221254 232 ntBASIC20.25■□□□□ 0.83
Usp54Q8BL06 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp54Q8BL06 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp54Q8BL06 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp54Q8BL06 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms