Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Gm12585-201ENSMUST00000117307 290 ntBASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Gm10275-202ENSMUST00000168697 495 ntBASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Gm10275-201ENSMUST00000092620 635 ntBASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Usp6nlQ80XC3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Mir6392-201ENSMUST00000184924 108 ntBASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Gm33320-201ENSMUST00000192232 530 ntBASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.97■□□□□ 0.15
Usp6nlQ80XC3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Usp6nlQ80XC3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Usp6nlQ80XC3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Usp6nlQ80XC3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Usp6nlQ80XC3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Usp6nlQ80XC3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Usp6nlQ80XC3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Usp6nlQ80XC3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
Usp6nlQ80XC3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Usp6nlQ80XC3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Usp6nlQ80XC3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Usp6nlQ80XC3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms