Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vrk1Q80X41 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vrk1Q80X41 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Vrk1Q80X41 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vrk1Q80X41 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vrk1Q80X41 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vrk1Q80X41 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vrk1Q80X41 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vrk1Q80X41 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vrk1Q80X41 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vrk1Q80X41 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm15321-201ENSMUST00000121290 288 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm29310-201ENSMUST00000185468 696 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm21825-201ENSMUST00000185728 696 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm29109-201ENSMUST00000185895 696 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm21896-201ENSMUST00000186520 696 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm21873-201ENSMUST00000186728 696 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm21794-201ENSMUST00000187056 696 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm21880-201ENSMUST00000187275 696 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm21826-201ENSMUST00000187451 696 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm21198-201ENSMUST00000188393 696 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm21749-201ENSMUST00000189343 696 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm21901-201ENSMUST00000189568 696 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm29424-201ENSMUST00000189716 696 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm28599-201ENSMUST00000189838 694 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm21867-201ENSMUST00000189917 696 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm29269-201ENSMUST00000190087 696 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm21722-201ENSMUST00000190153 696 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm28423-201ENSMUST00000190701 696 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm21899-201ENSMUST00000190745 696 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm21910-201ENSMUST00000191163 696 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm21849-201ENSMUST00000191571 696 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm28678-201ENSMUST00000191593 696 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm20910-201ENSMUST00000193268 696 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm21871-201ENSMUST00000194621 696 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.85□□□□□ -0.19
Vrk1Q80X41 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vrk1Q80X41 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.85□□□□□ -0.19
Vrk1Q80X41 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vrk1Q80X41 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vrk1Q80X41 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Vrk1Q80X41 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vrk1Q80X41 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Vrk1Q80X41 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vrk1Q80X41 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Vrk1Q80X41 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vrk1Q80X41 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vrk1Q80X41 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vrk1Q80X41 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vrk1Q80X41 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Vrk1Q80X41 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vrk1Q80X41 Gm15653-201ENSMUST00000119247 907 ntBASIC13.84□□□□□ -0.19
Vrk1Q80X41 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.84□□□□□ -0.19
Vrk1Q80X41 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.84□□□□□ -0.19
Vrk1Q80X41 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.84□□□□□ -0.19
Vrk1Q80X41 Gm6222-201ENSMUST00000120787 396 ntBASIC13.84□□□□□ -0.19
Vrk1Q80X41 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Vrk1Q80X41 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vrk1Q80X41 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.84□□□□□ -0.19
Vrk1Q80X41 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vrk1Q80X41 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vrk1Q80X41 Gm24694-201ENSMUST00000180054 110 ntBASIC13.84□□□□□ -0.19
Vrk1Q80X41 Gm27663-201ENSMUST00000184839 110 ntBASIC13.84□□□□□ -0.19
Vrk1Q80X41 Gm46209-201ENSMUST00000217912 553 ntBASIC13.84□□□□□ -0.19
Vrk1Q80X41 Gm16476-201ENSMUST00000221544 139 ntBASIC13.84□□□□□ -0.19
Vrk1Q80X41 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vrk1Q80X41 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vrk1Q80X41 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms