Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Gm9719-201ENSMUST00000162765 543 ntBASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Gm27533-201ENSMUST00000183800 152 ntBASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Gm27321-201ENSMUST00000185021 205 ntBASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Gm6888-201ENSMUST00000221983 706 ntBASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nudcd1Q6PIP5 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Mir8102-201ENSMUST00000184148 139 ntBASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.62□□□□□ -0.07
Nudcd1Q6PIP5 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Gm38294-201ENSMUST00000192831 381 ntBASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Olfr286-202ENSMUST00000205305 969 ntBASIC14.61□□□□□ -0.07
Nudcd1Q6PIP5 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms