Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Krt39Q6IFX4 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Krt39Q6IFX4 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Krt39Q6IFX4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Krt39Q6IFX4 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Krt39Q6IFX4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.06■□□□□ 0.16
Krt39Q6IFX4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Krt39Q6IFX4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Krt39Q6IFX4 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.06■□□□□ 0.16
Krt39Q6IFX4 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Krt39Q6IFX4 Gm2451-201ENSMUST00000199447 999 ntBASIC16.06■□□□□ 0.16
Krt39Q6IFX4 Gm10290-201ENSMUST00000200451 999 ntBASIC16.06■□□□□ 0.16
Krt39Q6IFX4 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Krt39Q6IFX4 Gm15590-201ENSMUST00000078419 552 ntBASIC16.06■□□□□ 0.16
Krt39Q6IFX4 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Krt39Q6IFX4 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Krt39Q6IFX4 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Krt39Q6IFX4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Krt39Q6IFX4 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Krt39Q6IFX4 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Krt39Q6IFX4 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Krt39Q6IFX4 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Krt39Q6IFX4 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Krt39Q6IFX4 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt39Q6IFX4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt39Q6IFX4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt39Q6IFX4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Krt39Q6IFX4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Krt39Q6IFX4 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.05■□□□□ 0.16
Krt39Q6IFX4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt39Q6IFX4 Mir5126-201ENSMUST00000175513 77 ntBASIC16.05■□□□□ 0.16
Krt39Q6IFX4 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.05■□□□□ 0.16
Krt39Q6IFX4 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt39Q6IFX4 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt39Q6IFX4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Krt39Q6IFX4 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt39Q6IFX4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Krt39Q6IFX4 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt39Q6IFX4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt39Q6IFX4 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt39Q6IFX4 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Krt39Q6IFX4 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt39Q6IFX4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt39Q6IFX4 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Krt39Q6IFX4 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Gm13036-201ENSMUST00000117799 748 ntBASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Gm12350-201ENSMUST00000121208 462 ntBASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Gm27300-201ENSMUST00000184085 97 ntBASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Gm27335-201ENSMUST00000184758 97 ntBASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Olfr286-202ENSMUST00000205305 969 ntBASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.04■□□□□ 0.16
Krt39Q6IFX4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Krt39Q6IFX4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.03■□□□□ 0.16
Krt39Q6IFX4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Krt39Q6IFX4 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Krt39Q6IFX4 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Krt39Q6IFX4 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.03■□□□□ 0.16
Krt39Q6IFX4 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Krt39Q6IFX4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.03■□□□□ 0.16
Krt39Q6IFX4 Gm13597-201ENSMUST00000121239 375 ntBASIC16.03■□□□□ 0.16
Krt39Q6IFX4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.03■□□□□ 0.16
Krt39Q6IFX4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.03■□□□□ 0.16
Krt39Q6IFX4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Krt39Q6IFX4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Krt39Q6IFX4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Krt39Q6IFX4 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Krt39Q6IFX4 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Krt39Q6IFX4 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms