Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.26■□□□□ 0.03
Scube3Q66PY1 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scube3Q66PY1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scube3Q66PY1 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scube3Q66PY1 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scube3Q66PY1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Scube3Q66PY1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.26■□□□□ 0.03
Scube3Q66PY1 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scube3Q66PY1 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.26■□□□□ 0.03
Scube3Q66PY1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scube3Q66PY1 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.26■□□□□ 0.03
Scube3Q66PY1 Gm29541-201ENSMUST00000191351 678 ntBASIC15.26■□□□□ 0.03
Scube3Q66PY1 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scube3Q66PY1 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scube3Q66PY1 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Scube3Q66PY1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scube3Q66PY1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scube3Q66PY1 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.26■□□□□ 0.03
Scube3Q66PY1 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scube3Q66PY1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scube3Q66PY1 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scube3Q66PY1 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.26■□□□□ 0.03
Scube3Q66PY1 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scube3Q66PY1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Scube3Q66PY1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scube3Q66PY1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Scube3Q66PY1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Gm13616-201ENSMUST00000120600 222 ntBASIC15.25■□□□□ 0.03
Scube3Q66PY1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 AC153961.1-201ENSMUST00000217760 385 ntBASIC15.25■□□□□ 0.03
Scube3Q66PY1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.25■□□□□ 0.03
Scube3Q66PY1 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.25■□□□□ 0.03
Scube3Q66PY1 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scube3Q66PY1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scube3Q66PY1 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scube3Q66PY1 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scube3Q66PY1 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scube3Q66PY1 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scube3Q66PY1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scube3Q66PY1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Scube3Q66PY1 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scube3Q66PY1 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.24■□□□□ 0.03
Scube3Q66PY1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scube3Q66PY1 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC15.24■□□□□ 0.03
Scube3Q66PY1 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.24■□□□□ 0.03
Scube3Q66PY1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.24■□□□□ 0.03
Scube3Q66PY1 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scube3Q66PY1 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.24■□□□□ 0.03
Scube3Q66PY1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scube3Q66PY1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scube3Q66PY1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Scube3Q66PY1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scube3Q66PY1 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scube3Q66PY1 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Scube3Q66PY1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scube3Q66PY1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scube3Q66PY1 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.24■□□□□ 0.03
Scube3Q66PY1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms