Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six3Q62233 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Six3Q62233 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.2□□□□□ -0.14
Six3Q62233 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Six3Q62233 Mzt1-203ENSMUST00000227948 952 ntBASIC14.2□□□□□ -0.14
Six3Q62233 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six3Q62233 Gm7461-201ENSMUST00000058918 827 ntBASIC14.2□□□□□ -0.14
Six3Q62233 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six3Q62233 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.2□□□□□ -0.14
Six3Q62233 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six3Q62233 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Six3Q62233 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six3Q62233 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six3Q62233 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six3Q62233 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six3Q62233 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six3Q62233 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six3Q62233 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Six3Q62233 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Six3Q62233 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Six3Q62233 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Six3Q62233 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.19□□□□□ -0.14
Six3Q62233 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.19□□□□□ -0.14
Six3Q62233 Gm17968-201ENSMUST00000194902 784 ntBASIC14.19□□□□□ -0.14
Six3Q62233 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.19□□□□□ -0.14
Six3Q62233 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.19□□□□□ -0.14
Six3Q62233 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Six3Q62233 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.19□□□□□ -0.14
Six3Q62233 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Six3Q62233 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.19□□□□□ -0.14
Six3Q62233 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Six3Q62233 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Six3Q62233 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Six3Q62233 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Six3Q62233 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.18□□□□□ -0.14
Six3Q62233 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Six3Q62233 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.18□□□□□ -0.14
Six3Q62233 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Six3Q62233 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.18□□□□□ -0.14
Six3Q62233 Gm9385-201ENSMUST00000117563 472 ntBASIC14.18□□□□□ -0.14
Six3Q62233 Gm14140-201ENSMUST00000119999 995 ntBASIC14.18□□□□□ -0.14
Six3Q62233 Gm27301-201ENSMUST00000184012 127 ntBASIC14.18□□□□□ -0.14
Six3Q62233 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Six3Q62233 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Six3Q62233 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Six3Q62233 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Six3Q62233 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six3Q62233 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Six3Q62233 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six3Q62233 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Six3Q62233 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.17□□□□□ -0.14
Six3Q62233 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Six3Q62233 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six3Q62233 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six3Q62233 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Six3Q62233 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms