Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd1Q61466 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd1Q61466 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.12■□□□□ 0.01
Smarcd1Q61466 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Smarcd1Q61466 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.11■□□□□ 0.01
Smarcd1Q61466 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Gm45453-201ENSMUST00000211758 853 ntBASIC15.11■□□□□ 0.01
Smarcd1Q61466 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.11■□□□□ 0.01
Smarcd1Q61466 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.11■□□□□ 0.01
Smarcd1Q61466 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd1Q61466 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Gm14767-201ENSMUST00000121559 586 ntBASIC15.1■□□□□ 0.01
Smarcd1Q61466 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Dupd1-202ENSMUST00000224735 548 ntBASIC15.1■□□□□ 0.01
Smarcd1Q61466 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.1■□□□□ 0.01
Smarcd1Q61466 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd1Q61466 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.1■□□□□ 0.01
Smarcd1Q61466 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd1Q61466 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd1Q61466 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd1Q61466 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd1Q61466 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Smarcd1Q61466 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Smarcd1Q61466 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.09■□□□□ 0.01
Smarcd1Q61466 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd1Q61466 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd1Q61466 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd1Q61466 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Smarcd1Q61466 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.09■□□□□ 0.01
Smarcd1Q61466 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd1Q61466 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd1Q61466 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Smarcd1Q61466 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Smarcd1Q61466 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd1Q61466 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd1Q61466 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Smarcd1Q61466 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smarcd1Q61466 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.08■□□□□ 0.01
Smarcd1Q61466 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.08■□□□□ 0
Smarcd1Q61466 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcd1Q61466 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcd1Q61466 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Smarcd1Q61466 Gm27680-201ENSMUST00000184192 160 ntBASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms