Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Usf1Q61069 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Usf1Q61069 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.17□□□□□ -0.3
Usf1Q61069 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.17□□□□□ -0.3
Usf1Q61069 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.17□□□□□ -0.3
Usf1Q61069 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Gm15678-201ENSMUST00000117573 960 ntBASIC13.17□□□□□ -0.3
Usf1Q61069 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.17□□□□□ -0.3
Usf1Q61069 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.17□□□□□ -0.3
Usf1Q61069 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Usf1Q61069 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Usf1Q61069 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Usf1Q61069 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usf1Q61069 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.16□□□□□ -0.3
Usf1Q61069 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.16□□□□□ -0.3
Usf1Q61069 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Usf1Q61069 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.16□□□□□ -0.3
Usf1Q61069 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Usf1Q61069 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Usf1Q61069 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Usf1Q61069 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.16□□□□□ -0.3
Usf1Q61069 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.16□□□□□ -0.3
Usf1Q61069 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.16□□□□□ -0.3
Usf1Q61069 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.16□□□□□ -0.3
Usf1Q61069 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Usf1Q61069 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.16□□□□□ -0.3
Usf1Q61069 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usf1Q61069 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usf1Q61069 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usf1Q61069 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Usf1Q61069 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usf1Q61069 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Usf1Q61069 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.15□□□□□ -0.3
Usf1Q61069 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.15□□□□□ -0.3
Usf1Q61069 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Usf1Q61069 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Usf1Q61069 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usf1Q61069 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usf1Q61069 Mir7654-201ENSMUST00000185082 70 ntBASIC13.15□□□□□ -0.3
Usf1Q61069 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Usf1Q61069 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.15□□□□□ -0.3
Usf1Q61069 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usf1Q61069 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Usf1Q61069 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Usf1Q61069 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usf1Q61069 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usf1Q61069 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.15□□□□□ -0.3
Usf1Q61069 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usf1Q61069 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usf1Q61069 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Usf1Q61069 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Usf1Q61069 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.15□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms