Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nr1h4Q60641 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nr1h4Q60641 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Nr1h4Q60641 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nr1h4Q60641 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nr1h4Q60641 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nr1h4Q60641 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.83□□□□□ -0.19
Nr1h4Q60641 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nr1h4Q60641 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nr1h4Q60641 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Nr1h4Q60641 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Nr1h4Q60641 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.83□□□□□ -0.2
Nr1h4Q60641 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Nr1h4Q60641 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nr1h4Q60641 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Gm44357-201ENSMUST00000195897 142 ntBASIC13.83□□□□□ -0.2
Nr1h4Q60641 Gm19658-201ENSMUST00000196231 138 ntBASIC13.83□□□□□ -0.2
Nr1h4Q60641 Gm44367-201ENSMUST00000196836 138 ntBASIC13.83□□□□□ -0.2
Nr1h4Q60641 Gm44350-201ENSMUST00000197197 138 ntBASIC13.83□□□□□ -0.2
Nr1h4Q60641 Gm44390-201ENSMUST00000197533 144 ntBASIC13.83□□□□□ -0.2
Nr1h4Q60641 Gm44313-201ENSMUST00000198018 138 ntBASIC13.83□□□□□ -0.2
Nr1h4Q60641 Gm44486-201ENSMUST00000198508 138 ntBASIC13.83□□□□□ -0.2
Nr1h4Q60641 Gm44314-201ENSMUST00000199263 138 ntBASIC13.83□□□□□ -0.2
Nr1h4Q60641 Gm44394-201ENSMUST00000199558 138 ntBASIC13.83□□□□□ -0.2
Nr1h4Q60641 Gm44484-201ENSMUST00000199873 138 ntBASIC13.83□□□□□ -0.2
Nr1h4Q60641 Gm44466-201ENSMUST00000200264 138 ntBASIC13.83□□□□□ -0.2
Nr1h4Q60641 Gm44359-201ENSMUST00000200671 138 ntBASIC13.83□□□□□ -0.2
Nr1h4Q60641 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.83□□□□□ -0.2
Nr1h4Q60641 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nr1h4Q60641 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nr1h4Q60641 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Nr1h4Q60641 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nr1h4Q60641 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nr1h4Q60641 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nr1h4Q60641 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nr1h4Q60641 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nr1h4Q60641 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nr1h4Q60641 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nr1h4Q60641 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Nr1h4Q60641 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.82□□□□□ -0.2
Nr1h4Q60641 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nr1h4Q60641 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nr1h4Q60641 Gm8749-201ENSMUST00000117737 331 ntBASIC13.82□□□□□ -0.2
Nr1h4Q60641 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nr1h4Q60641 Gm9726-201ENSMUST00000180321 678 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms