Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vmn1r223Q5SSA0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vmn1r223Q5SSA0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vmn1r223Q5SSA0 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Gm11764-201ENSMUST00000120221 623 ntBASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmn1r223Q5SSA0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Gm5682-201ENSMUST00000173402 505 ntBASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmn1r223Q5SSA0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vmn1r223Q5SSA0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vmn1r223Q5SSA0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vmn1r223Q5SSA0 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Vmn1r223Q5SSA0 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.71□□□□□ -0.38
Vmn1r223Q5SSA0 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vmn1r223Q5SSA0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Vmn1r223Q5SSA0 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.71□□□□□ -0.38
Vmn1r223Q5SSA0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vmn1r223Q5SSA0 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Vmn1r223Q5SSA0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Vmn1r223Q5SSA0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vmn1r223Q5SSA0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Vmn1r223Q5SSA0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vmn1r223Q5SSA0 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vmn1r223Q5SSA0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vmn1r223Q5SSA0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vmn1r223Q5SSA0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vmn1r223Q5SSA0 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vmn1r223Q5SSA0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vmn1r223Q5SSA0 Gm12008-201ENSMUST00000117791 755 ntBASIC12.7□□□□□ -0.38
Vmn1r223Q5SSA0 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.7□□□□□ -0.38
Vmn1r223Q5SSA0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vmn1r223Q5SSA0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.7□□□□□ -0.38
Vmn1r223Q5SSA0 Gm1401-201ENSMUST00000122048 772 ntBASIC12.7□□□□□ -0.38
Vmn1r223Q5SSA0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms