Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b2Q3UJB0 Gm10327-201ENSMUST00000105222 1002 ntBASIC18.62■□□□□ 0.57
Sf3b2Q3UJB0 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b2Q3UJB0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b2Q3UJB0 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b2Q3UJB0 Gm2639-201ENSMUST00000156881 1297 ntBASIC18.62■□□□□ 0.57
Sf3b2Q3UJB0 Gm24644-201ENSMUST00000157114 139 ntBASIC18.62■□□□□ 0.57
Sf3b2Q3UJB0 Gm37714-201ENSMUST00000194742 342 ntBASIC18.62■□□□□ 0.57
Sf3b2Q3UJB0 Gm38266-201ENSMUST00000194931 421 ntBASIC18.62■□□□□ 0.57
Sf3b2Q3UJB0 Gm5276-201ENSMUST00000196683 1047 ntBASIC18.62■□□□□ 0.57
Sf3b2Q3UJB0 Gm18934-201ENSMUST00000216671 1044 ntBASIC18.62■□□□□ 0.57
Sf3b2Q3UJB0 Gm10012-201ENSMUST00000078252 192 ntBASIC18.62■□□□□ 0.57
Sf3b2Q3UJB0 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC18.62■□□□□ 0.57
Sf3b2Q3UJB0 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b2Q3UJB0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b2Q3UJB0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b2Q3UJB0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b2Q3UJB0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b2Q3UJB0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b2Q3UJB0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b2Q3UJB0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b2Q3UJB0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b2Q3UJB0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b2Q3UJB0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b2Q3UJB0 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b2Q3UJB0 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b2Q3UJB0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b2Q3UJB0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC18.61■□□□□ 0.57
Sf3b2Q3UJB0 Gm29199-201ENSMUST00000187766 775 ntBASIC18.61■□□□□ 0.57
Sf3b2Q3UJB0 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC18.61■□□□□ 0.57
Sf3b2Q3UJB0 Gm43094-201ENSMUST00000196549 921 ntBASIC18.61■□□□□ 0.57
Sf3b2Q3UJB0 Gm19078-201ENSMUST00000206311 727 ntBASIC18.61■□□□□ 0.57
Sf3b2Q3UJB0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC18.61■□□□□ 0.57
Sf3b2Q3UJB0 Gm9823-201ENSMUST00000051212 327 ntBASIC18.61■□□□□ 0.57
Sf3b2Q3UJB0 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Sf3b2Q3UJB0 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Sf3b2Q3UJB0 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Sf3b2Q3UJB0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b2Q3UJB0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b2Q3UJB0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b2Q3UJB0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b2Q3UJB0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.6■□□□□ 0.57
Sf3b2Q3UJB0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b2Q3UJB0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.6■□□□□ 0.57
Sf3b2Q3UJB0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b2Q3UJB0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b2Q3UJB0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b2Q3UJB0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Sf3b2Q3UJB0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b2Q3UJB0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b2Q3UJB0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b2Q3UJB0 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b2Q3UJB0 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC18.6■□□□□ 0.57
Sf3b2Q3UJB0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b2Q3UJB0 Gm18905-201ENSMUST00000205454 928 ntBASIC18.6■□□□□ 0.57
Sf3b2Q3UJB0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b2Q3UJB0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Sf3b2Q3UJB0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Sf3b2Q3UJB0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b2Q3UJB0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b2Q3UJB0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Sf3b2Q3UJB0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Gm11524-201ENSMUST00000119349 807 ntBASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Gm12416-201ENSMUST00000120911 1008 ntBASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Gm10275-202ENSMUST00000168697 495 ntBASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Gm24196-201ENSMUST00000179161 110 ntBASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Mir8109-201ENSMUST00000184375 117 ntBASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Gm43068-201ENSMUST00000201095 1273 ntBASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Gm10275-201ENSMUST00000092620 635 ntBASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Sf3b2Q3UJB0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sf3b2Q3UJB0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sf3b2Q3UJB0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sf3b2Q3UJB0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sf3b2Q3UJB0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sf3b2Q3UJB0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.58■□□□□ 0.57
Sf3b2Q3UJB0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sf3b2Q3UJB0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sf3b2Q3UJB0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sf3b2Q3UJB0 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC18.58■□□□□ 0.56
Sf3b2Q3UJB0 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC18.58■□□□□ 0.56
Sf3b2Q3UJB0 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Sf3b2Q3UJB0 Gm27516-201ENSMUST00000184237 98 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms