Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Gm12350-201ENSMUST00000121208 462 ntBASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Mir5131-201ENSMUST00000175426 93 ntBASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cul4aQ3TCH7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Gm5177-201ENSMUST00000183092 997 ntBASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Gm45747-201ENSMUST00000212203 999 ntBASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Thap2-203ENSMUST00000218989 527 ntBASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cul4aQ3TCH7 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Gm28659-201ENSMUST00000188013 759 ntBASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms