Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3KNL4 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3KNL4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.29□□□□□ -0.12
Q3KNL4 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3KNL4 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3KNL4 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3KNL4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.29□□□□□ -0.12
Q3KNL4 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.29□□□□□ -0.12
Q3KNL4 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.29□□□□□ -0.12
Q3KNL4 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.29□□□□□ -0.12
Q3KNL4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3KNL4 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3KNL4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3KNL4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3KNL4 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3KNL4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Q3KNL4 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Q3KNL4 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Q3KNL4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3KNL4 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Q3KNL4 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3KNL4 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3KNL4 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.28□□□□□ -0.12
Q3KNL4 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.28□□□□□ -0.12
Q3KNL4 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.28□□□□□ -0.12
Q3KNL4 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Q3KNL4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Q3KNL4 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.28□□□□□ -0.12
Q3KNL4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.28□□□□□ -0.12
Q3KNL4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.28□□□□□ -0.12
Q3KNL4 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Q3KNL4 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.28□□□□□ -0.12
Q3KNL4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.28□□□□□ -0.12
Q3KNL4 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.28□□□□□ -0.12
Q3KNL4 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3KNL4 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Q3KNL4 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Q3KNL4 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Q3KNL4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Q3KNL4 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Q3KNL4 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Q3KNL4 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Q3KNL4 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Q3KNL4 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Q3KNL4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.27□□□□□ -0.12
Q3KNL4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Q3KNL4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.27□□□□□ -0.12
Q3KNL4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3KNL4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.27□□□□□ -0.13
Q3KNL4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.27□□□□□ -0.13
Q3KNL4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Q3KNL4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.27□□□□□ -0.13
Q3KNL4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3KNL4 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.27□□□□□ -0.13
Q3KNL4 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3KNL4 Gm15590-201ENSMUST00000078419 552 ntBASIC14.27□□□□□ -0.13
Q3KNL4 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Q3KNL4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3KNL4 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3KNL4 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3KNL4 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Q3KNL4 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3KNL4 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3KNL4 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Q3KNL4 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Q3KNL4 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3KNL4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3KNL4 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3KNL4 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3KNL4 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.26□□□□□ -0.13
Q3KNL4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Q3KNL4 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3KNL4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms