Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nhej1Q3KNJ2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Gm10060-201ENSMUST00000212002 111 ntBASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.48■□□□□ 0.07
Nhej1Q3KNJ2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Gm13036-201ENSMUST00000117799 748 ntBASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.47■□□□□ 0.07
Nhej1Q3KNJ2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms