Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Gm7222-201ENSMUST00000117512 906 ntBASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Gm7230-201ENSMUST00000173026 815 ntBASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Gm5682-201ENSMUST00000173402 505 ntBASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptchd3Q0EEE2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ptchd3Q0EEE2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
Ptchd3Q0EEE2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptchd3Q0EEE2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
Ptchd3Q0EEE2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ptchd3Q0EEE2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptchd3Q0EEE2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptchd3Q0EEE2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptchd3Q0EEE2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptchd3Q0EEE2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptchd3Q0EEE2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptchd3Q0EEE2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptchd3Q0EEE2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptchd3Q0EEE2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 Gm43767-201ENSMUST00000198933 381 ntBASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ptchd3Q0EEE2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms