Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Col6a2Q02788 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col6a2Q02788 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a2Q02788 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Col6a2Q02788 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a2Q02788 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Col6a2Q02788 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a2Q02788 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.48□□□□□ -0.09
Col6a2Q02788 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a2Q02788 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a2Q02788 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a2Q02788 Gm12151-201ENSMUST00000121374 290 ntBASIC14.48□□□□□ -0.09
Col6a2Q02788 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a2Q02788 Gm9719-201ENSMUST00000162765 543 ntBASIC14.48□□□□□ -0.09
Col6a2Q02788 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a2Q02788 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a2Q02788 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.48□□□□□ -0.09
Col6a2Q02788 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.48□□□□□ -0.09
Col6a2Q02788 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a2Q02788 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a2Q02788 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a2Q02788 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Col6a2Q02788 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.48□□□□□ -0.09
Col6a2Q02788 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Col6a2Q02788 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a2Q02788 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a2Q02788 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a2Q02788 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a2Q02788 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a2Q02788 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a2Q02788 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a2Q02788 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Col6a2Q02788 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a2Q02788 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a2Q02788 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Col6a2Q02788 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.48□□□□□ -0.09
Col6a2Q02788 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a2Q02788 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.48□□□□□ -0.09
Col6a2Q02788 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Col6a2Q02788 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Col6a2Q02788 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.47□□□□□ -0.09
Col6a2Q02788 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm13453-201ENSMUST00000118708 357 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.47□□□□□ -0.09
Col6a2Q02788 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.47□□□□□ -0.09
Col6a2Q02788 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm29310-201ENSMUST00000185468 696 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm21825-201ENSMUST00000185728 696 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm29109-201ENSMUST00000185895 696 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm21896-201ENSMUST00000186520 696 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm21873-201ENSMUST00000186728 696 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm21794-201ENSMUST00000187056 696 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm21880-201ENSMUST00000187275 696 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm21826-201ENSMUST00000187451 696 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm21198-201ENSMUST00000188393 696 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm21749-201ENSMUST00000189343 696 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm21901-201ENSMUST00000189568 696 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm29424-201ENSMUST00000189716 696 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm28599-201ENSMUST00000189838 694 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm21867-201ENSMUST00000189917 696 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm29269-201ENSMUST00000190087 696 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm21722-201ENSMUST00000190153 696 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm28423-201ENSMUST00000190701 696 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm21899-201ENSMUST00000190745 696 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm21910-201ENSMUST00000191163 696 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm21849-201ENSMUST00000191571 696 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm28678-201ENSMUST00000191593 696 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm20910-201ENSMUST00000193268 696 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Gm21871-201ENSMUST00000194621 696 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.47□□□□□ -0.09
Col6a2Q02788 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.47□□□□□ -0.09
Col6a2Q02788 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a2Q02788 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms