Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Gm5069-202ENSMUST00000192714 1011 ntBASIC20.27■□□□□ 0.83
Xrn1P97789 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Xrn1P97789 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Xrn1P97789 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
Xrn1P97789 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Xrn1P97789 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Xrn1P97789 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Xrn1P97789 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Xrn1P97789 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Xrn1P97789 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Xrn1P97789 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Xrn1P97789 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Xrn1P97789 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Xrn1P97789 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Xrn1P97789 Gm11793-201ENSMUST00000120433 981 ntBASIC20.26■□□□□ 0.83
Xrn1P97789 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Xrn1P97789 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Xrn1P97789 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Xrn1P97789 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Xrn1P97789 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Xrn1P97789 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Xrn1P97789 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Xrn1P97789 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC20.25■□□□□ 0.83
Xrn1P97789 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC20.25■□□□□ 0.83
Xrn1P97789 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC20.25■□□□□ 0.83
Xrn1P97789 AC154171.1-201ENSMUST00000224610 643 ntBASIC20.25■□□□□ 0.83
Xrn1P97789 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Xrn1P97789 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC20.25■□□□□ 0.83
Xrn1P97789 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Xrn1P97789 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Xrn1P97789 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Xrn1P97789 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Xrn1P97789 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Xrn1P97789 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Xrn1P97789 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Xrn1P97789 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Xrn1P97789 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Xrn1P97789 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Xrn1P97789 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Xrn1P97789 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Xrn1P97789 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Xrn1P97789 Mir686-201ENSMUST00000102174 109 ntBASIC20.24■□□□□ 0.83
Xrn1P97789 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Xrn1P97789 Gm12329-201ENSMUST00000120829 1007 ntBASIC20.24■□□□□ 0.83
Xrn1P97789 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Xrn1P97789 Gm45930-201ENSMUST00000221330 292 ntBASIC20.24■□□□□ 0.83
Xrn1P97789 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Xrn1P97789 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Xrn1P97789 Gm10339-203ENSMUST00000225409 1671 ntBASIC20.24■□□□□ 0.83
Xrn1P97789 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Xrn1P97789 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Xrn1P97789 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Xrn1P97789 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Xrn1P97789 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Xrn1P97789 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC20.24■□□□□ 0.83
Xrn1P97789 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Xrn1P97789 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Xrn1P97789 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Xrn1P97789 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Xrn1P97789 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Xrn1P97789 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Xrn1P97789 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC20.24■□□□□ 0.83
Xrn1P97789 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Xrn1P97789 Gm29649-201ENSMUST00000185649 419 ntBASIC20.24■□□□□ 0.83
Xrn1P97789 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Xrn1P97789 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Xrn1P97789 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Xrn1P97789 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Xrn1P97789 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Xrn1P97789 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Xrn1P97789 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Xrn1P97789 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Xrn1P97789 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Xrn1P97789 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Xrn1P97789 Gm15371-201ENSMUST00000117057 784 ntBASIC20.23■□□□□ 0.83
Xrn1P97789 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC20.23■□□□□ 0.83
Xrn1P97789 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Xrn1P97789 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Xrn1P97789 Gm38241-201ENSMUST00000192641 898 ntBASIC20.23■□□□□ 0.83
Xrn1P97789 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Xrn1P97789 Gm4959-201ENSMUST00000197271 1044 ntBASIC20.23■□□□□ 0.83
Xrn1P97789 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC20.23■□□□□ 0.83
Xrn1P97789 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC20.23■□□□□ 0.83
Xrn1P97789 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC20.23■□□□□ 0.83
Xrn1P97789 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Xrn1P97789 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Xrn1P97789 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.23■□□□□ 0.83
Xrn1P97789 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Xrn1P97789 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Xrn1P97789 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Xrn1P97789 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC20.23■□□□□ 0.83
Xrn1P97789 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Xrn1P97789 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Xrn1P97789 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Xrn1P97789 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Xrn1P97789 Gm6013-201ENSMUST00000212264 699 ntBASIC20.22■□□□□ 0.83
Xrn1P97789 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC20.22■□□□□ 0.83
Xrn1P97789 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Xrn1P97789 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Xrn1P97789 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms