Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.93□□□□□ -0.34
H3f3aP84244 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H3f3aP84244 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H3f3aP84244 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H3f3aP84244 Gm8396-201ENSMUST00000057361 823 ntBASIC12.93□□□□□ -0.34
H3f3aP84244 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
H3f3aP84244 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
H3f3aP84244 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H3f3aP84244 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H3f3aP84244 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.93□□□□□ -0.34
H3f3aP84244 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H3f3aP84244 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
H3f3aP84244 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
H3f3aP84244 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H3f3aP84244 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
H3f3aP84244 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H3f3aP84244 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
H3f3aP84244 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
H3f3aP84244 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
H3f3aP84244 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
H3f3aP84244 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H3f3aP84244 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H3f3aP84244 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H3f3aP84244 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.93□□□□□ -0.34
H3f3aP84244 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H3f3aP84244 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.93□□□□□ -0.34
H3f3aP84244 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3f3aP84244 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.92□□□□□ -0.34
H3f3aP84244 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.92□□□□□ -0.34
H3f3aP84244 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3f3aP84244 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3f3aP84244 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3f3aP84244 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H3f3aP84244 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3f3aP84244 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3f3aP84244 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3f3aP84244 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3f3aP84244 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3f3aP84244 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.92□□□□□ -0.34
H3f3aP84244 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
H3f3aP84244 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.92□□□□□ -0.34
H3f3aP84244 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H3f3aP84244 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.92□□□□□ -0.34
H3f3aP84244 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.92□□□□□ -0.34
H3f3aP84244 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.92□□□□□ -0.34
H3f3aP84244 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H3f3aP84244 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
H3f3aP84244 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3f3aP84244 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3f3aP84244 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3f3aP84244 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3f3aP84244 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3f3aP84244 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
H3f3aP84244 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.92□□□□□ -0.34
H3f3aP84244 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
H3f3aP84244 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3f3aP84244 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.92□□□□□ -0.34
H3f3aP84244 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3f3aP84244 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H3f3aP84244 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3f3aP84244 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3f3aP84244 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3f3aP84244 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3f3aP84244 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3f3aP84244 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3f3aP84244 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.91□□□□□ -0.34
H3f3aP84244 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H3f3aP84244 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
H3f3aP84244 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
H3f3aP84244 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.91□□□□□ -0.34
H3f3aP84244 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H3f3aP84244 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.91□□□□□ -0.34
H3f3aP84244 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3f3aP84244 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3f3aP84244 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3f3aP84244 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3f3aP84244 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
H3f3aP84244 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3f3aP84244 Gm22065-201ENSMUST00000103753 110 ntBASIC12.91□□□□□ -0.34
H3f3aP84244 Gm22066-201ENSMUST00000103761 110 ntBASIC12.91□□□□□ -0.34
H3f3aP84244 Gm24932-201ENSMUST00000103763 110 ntBASIC12.91□□□□□ -0.34
H3f3aP84244 Gm24115-201ENSMUST00000103799 110 ntBASIC12.91□□□□□ -0.34
H3f3aP84244 Gm22190-201ENSMUST00000103827 110 ntBASIC12.91□□□□□ -0.34
H3f3aP84244 Gm22191-201ENSMUST00000103831 110 ntBASIC12.91□□□□□ -0.34
H3f3aP84244 Gm24721-201ENSMUST00000103849 110 ntBASIC12.91□□□□□ -0.34
H3f3aP84244 Gm28018-201ENSMUST00000103869 110 ntBASIC12.91□□□□□ -0.34
H3f3aP84244 Gm26399-201ENSMUST00000103937 110 ntBASIC12.91□□□□□ -0.34
H3f3aP84244 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H3f3aP84244 Gm26308-201ENSMUST00000157768 69 ntBASIC12.91□□□□□ -0.34
H3f3aP84244 Gm23547-201ENSMUST00000158210 271 ntBASIC12.91□□□□□ -0.34
H3f3aP84244 Gm25349-201ENSMUST00000177728 110 ntBASIC12.91□□□□□ -0.34
H3f3aP84244 Gm23616-201ENSMUST00000177797 110 ntBASIC12.91□□□□□ -0.34
H3f3aP84244 Gm25871-201ENSMUST00000177816 110 ntBASIC12.91□□□□□ -0.34
H3f3aP84244 Gm24752-201ENSMUST00000178240 110 ntBASIC12.91□□□□□ -0.34
H3f3aP84244 Gm24496-201ENSMUST00000178287 110 ntBASIC12.91□□□□□ -0.34
H3f3aP84244 Gm25649-201ENSMUST00000178476 110 ntBASIC12.91□□□□□ -0.34
H3f3aP84244 Gm25548-201ENSMUST00000178681 110 ntBASIC12.91□□□□□ -0.34
H3f3aP84244 Gm23147-201ENSMUST00000178841 110 ntBASIC12.91□□□□□ -0.34
H3f3aP84244 Gm26095-201ENSMUST00000179270 110 ntBASIC12.91□□□□□ -0.34
H3f3aP84244 Gm22171-201ENSMUST00000179283 110 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms