Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smad1P70340 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smad1P70340 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smad1P70340 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Smad1P70340 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smad1P70340 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smad1P70340 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smad1P70340 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smad1P70340 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smad1P70340 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smad1P70340 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smad1P70340 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Smad1P70340 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Smad1P70340 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smad1P70340 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smad1P70340 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smad1P70340 AA543401-201ENSMUST00000164248 1269 ntBASIC14.98□□□□□ -0.01
Smad1P70340 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.98□□□□□ -0.01
Smad1P70340 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.98□□□□□ -0.01
Smad1P70340 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smad1P70340 Gm44492-201ENSMUST00000197012 141 ntBASIC14.98□□□□□ -0.01
Smad1P70340 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smad1P70340 Gm7787-201ENSMUST00000216858 688 ntBASIC14.98□□□□□ -0.01
Smad1P70340 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smad1P70340 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.98□□□□□ -0.01
Smad1P70340 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
Smad1P70340 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Smad1P70340 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smad1P70340 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Smad1P70340 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smad1P70340 Acot6-202ENSMUST00000222921 3622 ntBASIC14.98□□□□□ -0.01
Smad1P70340 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smad1P70340 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smad1P70340 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smad1P70340 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smad1P70340 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smad1P70340 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smad1P70340 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Smad1P70340 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Smad1P70340 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smad1P70340 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smad1P70340 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smad1P70340 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smad1P70340 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smad1P70340 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.97□□□□□ -0.01
Smad1P70340 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smad1P70340 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smad1P70340 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.97□□□□□ -0.01
Smad1P70340 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.97□□□□□ -0.01
Smad1P70340 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smad1P70340 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.97□□□□□ -0.01
Smad1P70340 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smad1P70340 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smad1P70340 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smad1P70340 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Smad1P70340 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smad1P70340 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smad1P70340 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smad1P70340 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.97□□□□□ -0.01
Smad1P70340 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Smad1P70340 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smad1P70340 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smad1P70340 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smad1P70340 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smad1P70340 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smad1P70340 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Smad1P70340 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smad1P70340 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.96□□□□□ -0.01
Smad1P70340 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smad1P70340 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smad1P70340 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smad1P70340 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
Smad1P70340 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.96□□□□□ -0.01
Smad1P70340 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Smad1P70340 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.96□□□□□ -0.01
Smad1P70340 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.96□□□□□ -0.01
Smad1P70340 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smad1P70340 Gm43767-201ENSMUST00000198933 381 ntBASIC14.96□□□□□ -0.01
Smad1P70340 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.96□□□□□ -0.01
Smad1P70340 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Smad1P70340 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Smad1P70340 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smad1P70340 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smad1P70340 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smad1P70340 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Smad1P70340 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smad1P70340 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smad1P70340 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smad1P70340 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smad1P70340 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.96□□□□□ -0.01
Smad1P70340 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smad1P70340 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smad1P70340 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smad1P70340 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Smad1P70340 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smad1P70340 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smad1P70340 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smad1P70340 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Smad1P70340 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smad1P70340 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms