Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.81□□□□□ -0.36
Sec61a1P61620 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
Sec61a1P61620 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sec61a1P61620 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Sec61a1P61620 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.81□□□□□ -0.36
Sec61a1P61620 Gm11594-201ENSMUST00000122313 162 ntBASIC12.81□□□□□ -0.36
Sec61a1P61620 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Gm8000-201ENSMUST00000188378 592 ntBASIC12.81□□□□□ -0.36
Sec61a1P61620 Gm37153-201ENSMUST00000193637 231 ntBASIC12.81□□□□□ -0.36
Sec61a1P61620 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.81□□□□□ -0.36
Sec61a1P61620 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.81□□□□□ -0.36
Sec61a1P61620 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sec61a1P61620 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Sec61a1P61620 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sec61a1P61620 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.81□□□□□ -0.36
Sec61a1P61620 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a1P61620 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Sec61a1P61620 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.8□□□□□ -0.36
Sec61a1P61620 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.8□□□□□ -0.36
Sec61a1P61620 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.8□□□□□ -0.36
Sec61a1P61620 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sec61a1P61620 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Sec61a1P61620 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.8□□□□□ -0.36
Sec61a1P61620 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sec61a1P61620 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.8□□□□□ -0.36
Sec61a1P61620 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.8□□□□□ -0.36
Sec61a1P61620 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sec61a1P61620 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61a1P61620 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Gm11764-201ENSMUST00000120221 623 ntBASIC12.79□□□□□ -0.36
Sec61a1P61620 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Gm4899-201ENSMUST00000178708 719 ntBASIC12.79□□□□□ -0.36
Sec61a1P61620 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.79□□□□□ -0.36
Sec61a1P61620 Gm5264-201ENSMUST00000190584 848 ntBASIC12.79□□□□□ -0.36
Sec61a1P61620 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.79□□□□□ -0.36
Sec61a1P61620 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.79□□□□□ -0.36
Sec61a1P61620 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms