Protein–RNA interactions for Protein: P58873

Rhbdl3, Rhomboid-related protein 3, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdl3P58873 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rhbdl3P58873 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rhbdl3P58873 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rhbdl3P58873 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rhbdl3P58873 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rhbdl3P58873 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC17.13■□□□□ 0.33
Rhbdl3P58873 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rhbdl3P58873 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rhbdl3P58873 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rhbdl3P58873 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Gm14452-201ENSMUST00000118680 1632 ntBASIC17.12■□□□□ 0.33
Rhbdl3P58873 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Gm12091-201ENSMUST00000146791 830 ntBASIC17.12■□□□□ 0.33
Rhbdl3P58873 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Gm9115-201ENSMUST00000120192 1348 ntBASIC17.12■□□□□ 0.33
Rhbdl3P58873 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhbdl3P58873 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rhbdl3P58873 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rhbdl3P58873 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhbdl3P58873 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhbdl3P58873 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhbdl3P58873 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rhbdl3P58873 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.11■□□□□ 0.33
Rhbdl3P58873 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC17.11■□□□□ 0.33
Rhbdl3P58873 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rhbdl3P58873 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC17.11■□□□□ 0.33
Rhbdl3P58873 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rhbdl3P58873 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.11■□□□□ 0.33
Rhbdl3P58873 Gm45059-201ENSMUST00000205558 1077 ntBASIC17.11■□□□□ 0.33
Rhbdl3P58873 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC17.11■□□□□ 0.33
Rhbdl3P58873 AC139580.1-202ENSMUST00000223574 928 ntBASIC17.11■□□□□ 0.33
Rhbdl3P58873 AC238811.3-201ENSMUST00000225422 709 ntBASIC17.11■□□□□ 0.33
Rhbdl3P58873 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
Rhbdl3P58873 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhbdl3P58873 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC17.11■□□□□ 0.33
Rhbdl3P58873 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhbdl3P58873 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rhbdl3P58873 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhbdl3P58873 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rhbdl3P58873 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhbdl3P58873 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhbdl3P58873 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rhbdl3P58873 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhbdl3P58873 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdl3P58873 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.1■□□□□ 0.33
Rhbdl3P58873 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.1■□□□□ 0.33
Rhbdl3P58873 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdl3P58873 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhbdl3P58873 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.1■□□□□ 0.33
Rhbdl3P58873 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rhbdl3P58873 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rhbdl3P58873 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rhbdl3P58873 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rhbdl3P58873 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rhbdl3P58873 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC17.09■□□□□ 0.33
Rhbdl3P58873 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rhbdl3P58873 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms