Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tubgcp3P58854 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tubgcp3P58854 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Tubgcp3P58854 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tubgcp3P58854 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tubgcp3P58854 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tubgcp3P58854 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tubgcp3P58854 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tubgcp3P58854 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tubgcp3P58854 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tubgcp3P58854 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.83□□□□□ -0.03
Tubgcp3P58854 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.83□□□□□ -0.03
Tubgcp3P58854 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tubgcp3P58854 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tubgcp3P58854 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tubgcp3P58854 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Tubgcp3P58854 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tubgcp3P58854 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tubgcp3P58854 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.83□□□□□ -0.04
Tubgcp3P58854 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.83□□□□□ -0.04
Tubgcp3P58854 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.83□□□□□ -0.04
Tubgcp3P58854 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Tubgcp3P58854 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.82□□□□□ -0.04
Tubgcp3P58854 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Tubgcp3P58854 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubgcp3P58854 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Tubgcp3P58854 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubgcp3P58854 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.82□□□□□ -0.04
Tubgcp3P58854 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubgcp3P58854 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tubgcp3P58854 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.82□□□□□ -0.04
Tubgcp3P58854 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Tubgcp3P58854 Olfr286-202ENSMUST00000205305 969 ntBASIC14.82□□□□□ -0.04
Tubgcp3P58854 Gm44771-201ENSMUST00000206975 626 ntBASIC14.82□□□□□ -0.04
Tubgcp3P58854 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Tubgcp3P58854 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.82□□□□□ -0.04
Tubgcp3P58854 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubgcp3P58854 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubgcp3P58854 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.82□□□□□ -0.04
Tubgcp3P58854 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubgcp3P58854 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubgcp3P58854 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Tubgcp3P58854 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.82□□□□□ -0.04
Tubgcp3P58854 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubgcp3P58854 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tubgcp3P58854 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tubgcp3P58854 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubgcp3P58854 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Mir8117-201ENSMUST00000184773 107 ntBASIC14.81□□□□□ -0.04
Tubgcp3P58854 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubgcp3P58854 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.81□□□□□ -0.04
Tubgcp3P58854 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.81□□□□□ -0.04
Tubgcp3P58854 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Tubgcp3P58854 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Tubgcp3P58854 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms