Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ctdsp1P58466 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Gm15378-201ENSMUST00000121894 207 ntBASIC11.33□□□□□ -0.6
Ctdsp1P58466 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC11.33□□□□□ -0.6
Ctdsp1P58466 Gm42569-201ENSMUST00000200539 472 ntBASIC11.33□□□□□ -0.6
Ctdsp1P58466 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.33□□□□□ -0.6
Ctdsp1P58466 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ctdsp1P58466 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Gm19164-201ENSMUST00000210667 640 ntBASIC11.32□□□□□ -0.6
Ctdsp1P58466 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC11.32□□□□□ -0.6
Ctdsp1P58466 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ctdsp1P58466 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.32□□□□□ -0.6
Ctdsp1P58466 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ctdsp1P58466 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.31□□□□□ -0.6
Ctdsp1P58466 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.31□□□□□ -0.6
Ctdsp1P58466 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ctdsp1P58466 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.31□□□□□ -0.6
Ctdsp1P58466 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.31□□□□□ -0.6
Ctdsp1P58466 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Gm43767-201ENSMUST00000198933 381 ntBASIC11.31□□□□□ -0.6
Ctdsp1P58466 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ctdsp1P58466 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms